BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B10LP1|AL429346
(996 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1085 1893 0.0
>3x_Contig1085
Length = 5008
Score = 1893 bits (951), Expect = 0.0
Identities = 983/997 (98%), Gaps = 1/997 (0%)
Strand = Plus / Minus
Query: 1 gctgagtttgaagttcaatgggaaatacagaagacagacttgaaggggaatctcattgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3596 gctgagtttgaagttcaatgggaaatacagaagacagacttgaaggggaatctcattgct 3537
Query: 61 gaaactcctaggcgaagaagaagaggagatgctacagaacatgaagtgatttatttggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3536 gaaactcctaggcgaagaagaagaggagatgctacagaacatgaagtgattaatttggta 3477
Query: 121 cgatacgatggagtcagactttatcctggtgttacgattgtgtgccaggtagagggtgca 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3476 cgatacgatggagtcagactttatcctggtgttacgattgtgtgcaaggtagagggtgca 3417
Query: 181 gacgagttatcagcgtatatgatccatgaggtgcgattgaatacaagcmattacgtagaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3416 gacgagttatcagcgtatatgatccatgaggtgcgattgaatacaagcaattacgtagaa 3357
Query: 241 ctctggtgtttgaactatttgagttggtacgagatccatgctgcggaaagatataaacag 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3356 ctctggtgtttgaactatttgagttggtacgagatcaatgctgcggaaagatataaacag 3297
Query: 301 cttgatggagagttttatgagactaataaggaaaaaggtgacaaattttttgaggaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3296 cttgatggagagttttatgagactaataaggaaaaaggtgacaaattttttgaggaaacc 3237
Query: 361 ttcgcgtcacaatcgataaagaacgaattgtatttgacagctgagctttcagagatttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3236 ttcgcgtcacaatcgataaagaacgaattgtatttgacagctgagctttcagagatttat 3177
Query: 421 ctacgggacttgcaatttgtagctaatattaahhatgaaaaggagtntttagactctgtc 480
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 3176 ctacgggacttgcaatttgtagctaatattaaaaatgaaaaggagtatttagactctgtc 3117
Query: 481 aatgaagggaaaatggattctaatatgtttttatgtcgatctgcatgcttgccttcagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3116 aatgaagggaaaatggattctaatatgtttttatgtcgatctgcatgcttgccttcagga 3057
Query: 541 actaatctggcggatttagatatacatttctttgaagaaaaaatacgttcctcgaatcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3056 actaatctggcggatttagatatacatttctttgaagaaaaaatacgttcctcgaatcct 2997
Query: 601 aaggtgtctctggagtntttgcgtgatattactttacccaagcttccaaaacctttaaat 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2996 aaggtgtctctggagtatttgcgtgatattactttacccaagcttccaaaacctttaaat 2937
Query: 661 aaatccaaggtccacgcacgagagaaggtagtggcgacgaaattgcagtccgacaacaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2936 aaatccaaggtccacgcacgagagaaggtagtggcgacgaaattgcagtccgacaacaca 2877
Query: 721 ccaagcaaaaaaagctttcaacaaacagtgagccaaaccaacgctgaagtccaacgcatt 780
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2876 ccaagcaaaaaaagctttcaacaaacagtgagcaaaaccaacgctgaagtccaacgcatt 2817
Query: 781 gcatctactattgttaacgaaaaggaagctatatcagataatgaatcggatttatctgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2816 gcatctactattgttaacgaaaaggaagctatatcagataatgaatcggatttatctgaa 2757
Query: 841 tatcacgaaagtwaagaagagtttgcaaacgcatcctcttcggacagtgatgaagagttt 900
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2756 tatcacgaaagtaaagaagagtttgcaaacgcatcctcttcggacagtgatgaagagttt 2697
Query: 901 gaagattaccagtctgcagragagcttgcaattgtagaacctgccaagaaaaaggtgaga 960
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2696 gaagattaccagtctgcagaagagcttgcaattgtagaacctgccaagaaaaaggtgaga 2637
Query: 961 tctattaaaccagatata-ccatttyaccagttaaat 996
|||||||||||||||||| |||||| |||||| ||||
Sbjct: 2636 tctattaaaccagatatacccatttcaccagtaaaat 2600
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7604
Number of Sequences: 1807
Number of extensions: 7604
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 996
length of database: 10,358,551
effective HSP length: 16
effective length of query: 980
effective length of database: 10,329,639
effective search space: 10123046220
effective search space used: 10123046220
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)